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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015829534.1_cds_XP_016503780.1_17293
CDS Infomation

[gene=LOC107821836] [db_xref=GeneID:107821836] [protein=nicalin-1-like isoform X1] [protein_id=XP_016503780.1] [location=join(83196..83484,88534..88697,89637..89740,90630..90696,91783..91875,91955..92119,92208..92348,92445..92522,95205..95317,95404..95464,96678..96845,97157..97258,98112..98201,98394..98456)] [gbkey=CDS]
Sequence

ATGGCGAATTCTCGTAGTAAACCAGTAGTAATAGACCCGATGTACTACCCAGTGATTGCT
TTAATCATCGCCGTTATCGCCTTTGTTGAACTCTCCGACGCCGTCACCGTCGTTGATGTC
TACCGGCTTGTTCAGTACGATATCTCCGGTGTCCCCTTCGGTTCTCGGCTCGCTGTTCTT
AATCACCACGCTGGCTCGTCCTTATTTGCTTCTGGTGGCTCCGGTTCCGATCTCTCTCGT
ACGGTTCTCATTCTTCCGGTTAGGGAATTGGATCCCACTCTCATTAAAGAATATATTGAA
CAGAAAAAGCTATTAGGGGGTCTACTGCTTTTACTCCCCCCCAAACTTAGTCCAGAAAAT
CTAGACAACGCATTTGGTGCTGATGAGGGTATTAACAGCCTGATGAGCAAATTGGCTGAG
TTGGAACGGTTGCTTACGCATTCTAATATCCCTTATCCTGTATATTTTGCTTTCGAGGAT
GACAATATCAATGCTGTACTAGCTGAAGTTAAGAGAAACGATGCTAGTGGTCAACCTGCA
ACAGCTACCACAGGCGGCTACAAGCTTGTTGTTGCTGCCTCAGATCCTAAGAGAATTGCG
TCCCCCAACATTGCAAATATTCAGGGATGGTTACCAGGACTTAAAGTTGATGGAGACTCA
AATCAACTCCCAACTATTGCCATAGTGGCTTCATATGACACATTTGGGGCTGCACCAACA
TTGTCAGTGGGAAGTGATAGTAATGGAAGTGGTGTAGTGGCACTACTTGAAATTGCTAGG
TTGTTTTCTGCTCTATATTCAAATCCTAAAACTAGAGGTAGATATAATTTACTCTTTGGA
TTGACATCTGGTGGACCGTATAACTACAATGGAACTCAGAAGTGGCTTCGGAGTTTTGAC
CAGCGTCTACGTGAGAGTATAGACTATGCTATCTGTTTGAATAGTGTTGGGTCCCTTGGC
AATGAGTTACATCTTCATGTCTCCAAACCTCCAGAAAATGCCTACATACAGCAGATATTC
CAGGGTTTCTCTACCGTAGCAGAAGAATTGGGCCTTCAAGTTGGTCTTAAGCACAAGAAA
ATAAACATCTCAAATCCTCGAGTAGCCTGGGAGCATGAACAGTTTTCAAGGTTGAGAGTC
ACTGCAGCAACACTATCTGAACTTTCTGCTGCACCTGAATTACTGGAAAGCACAGGACAT
CTGGCTGATAACAGACATTTTGTCAGTGAAGCCTCAATCATACGAAGTGTCAAGCTTGTT
GCTGAAAGTCTAGCGAGACACATTTATAACCAGGAGCAGAAAAACATAAGCATATTTGCA
GACGATAGTAGTTTAGCCGTCAATCCTTCCTACATAAGGTCTTGGCTAGATCTTTTATCT
ACAACACCTCGAGTGGCACCTTTTCTTTCAAAAAATGACCCGCTTATTAAGGCACTGGAA
AAGGAATTAGCTGATCATACTGCAGAGGTGAATGTACAGCATGAGACTCTAGATGGAATG
TTCACTTTTTACGATTCAACTAGTGGCAAGTTGCATATATATCAGGTTGCCAGCGTGACA
TTTGACTTGCTTTTGCTGTTGGTACTAGGATCATACTTGATTACACTTTTCAGTTTTCTT
TTTATCACCACCAGGGGTCTTGACGATCTTATTAGTCTATTTCGTCGTCCCCCATCACGG
AAAGTAAAAGCTGCTTAA

Peptide Sequence

PEP ID

XP_016503780.1
PEP Infomation

PREDICTED: nicalin-1-like isoform X1 [Nicotiana tabacum]
Sequence

MANSRSKPVVIDPMYYPVIALIIAVIAFVELSDAVTVVDVYRLVQYDISGVPFGSRLAVL
NHHAGSSLFASGGSGSDLSRTVLILPVRELDPTLIKEYIEQKKLLGGLLLLLPPKLSPEN
LDNAFGADEGINSLMSKLAELERLLTHSNIPYPVYFAFEDDNINAVLAEVKRNDASGQPA
TATTGGYKLVVAASDPKRIASPNIANIQGWLPGLKVDGDSNQLPTIAIVASYDTFGAAPT
LSVGSDSNGSGVVALLEIARLFSALYSNPKTRGRYNLLFGLTSGGPYNYNGTQKWLRSFD
QRLRESIDYAICLNSVGSLGNELHLHVSKPPENAYIQQIFQGFSTVAEELGLQVGLKHKK
INISNPRVAWEHEQFSRLRVTAATLSELSAAPELLESTGHLADNRHFVSEASIIRSVKLV
AESLARHIYNQEQKNISIFADDSSLAVNPSYIRSWLDLLSTTPRVAPFLSKNDPLIKALE
KELADHTAEVNVQHETLDGMFTFYDSTSGKLHIYQVASVTFDLLLLLVLGSYLITLFSFL
FITTRGLDDLISLFRRPPSRKVKAA

Transcript Sequence

Gene sequence data has not been registered.